Detailed information of SNP:



SNP ID: sf0610441149(Gbrowse)

Chromosome: chr06

Position: 10441149
Major allele: T

Minor allele: C

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of C(minor allele)
All1414 92.64% 7.36%
All Indica794 94.08% 5.92%
All Japonica497 89.13% 10.87%
Aus67 98.51% 1.49%
Indica I372 98.39% 1.61%
Indica II213 89.20% 10.80%
Indica Intermediate209 91.39% 8.61%
Temperate Japonica335 84.48% 15.52%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 97.06% 2.94%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0610441149 T->C INTERGENIC None