Detailed information of SNP:
|
SNP ID:
sf0610441279(Gbrowse)
Chromosome: chr06 Position: 10441279 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 90.86% | 9.14% |
| All Indica | 793 | 90.92% | 9.08% |
| All Japonica | 497 | 88.93% | 11.07% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 374 | 98.66% | 1.34% |
| Indica II | 211 | 84.36% | 15.64% |
| Indica Intermediate | 208 | 83.65% | 16.35% |
| Temperate Japonica | 335 | 84.48% | 15.52% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610441279 | G->A | INTERGENIC | None |