Detailed information of SNP:
|
SNP ID:
sf0610456876(Gbrowse)
Chromosome: chr06 Position: 10456876 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 54.55% | 45.45% |
| All Indica | 797 | 84.57% | 15.43% |
| All Japonica | 497 | 13.28% | 86.72% |
| Aus | 67 | 13.43% | 86.57% |
| Indica I | 375 | 76.53% | 23.47% |
| Indica II | 213 | 95.77% | 4.23% |
| Indica Intermediate | 209 | 87.56% | 12.44% |
| Temperate Japonica | 335 | 14.63% | 85.37% |
| Tropical Japonica | 94 | 11.70% | 88.30% |
| Japonica Intermediate | 68 | 8.82% | 91.18% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 54.76% | 45.24% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610456876 | A->G | INTERGENIC | None |