Detailed information of SNP:
|
SNP ID:
sf0610457026(Gbrowse)
Chromosome: chr06 Position: 10457026 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 58.87% | 41.13% |
| All Indica | 796 | 30.90% | 69.10% |
| All Japonica | 497 | 98.99% | 1.01% |
| Aus | 67 | 86.57% | 13.43% |
| Indica I | 373 | 26.54% | 73.46% |
| Indica II | 213 | 18.31% | 81.69% |
| Indica Intermediate | 210 | 51.43% | 48.57% |
| Temperate Japonica | 335 | 99.10% | 0.90% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 58.54% | 41.46% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610457026 | G->A | INTERGENIC | None |