Detailed information of SNP:
|
SNP ID:
sf0610460775(Gbrowse)
Chromosome: chr06 Position: 10460775 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1414 | 58.91% | 41.09% |
| All Indica | 795 | 30.57% | 69.43% |
| All Japonica | 497 | 99.40% | 0.60% |
| Aus | 67 | 86.57% | 13.43% |
| Indica I | 372 | 25.27% | 74.73% |
| Indica II | 213 | 18.78% | 81.22% |
| Indica Intermediate | 210 | 51.90% | 48.10% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 60.98% | 39.02% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610460775 | G->A | INTERGENIC | None |