Detailed information of SNP:
SNP ID:
sf0610461355(Gbrowse)
Chromosome: chr06 Position: 10461355 |
Major allele:
A
Minor allele: G Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1419 | 57.58% | 42.42% |
All Indica | 799 | 92.74% | 7.26% |
All Japonica | 497 | 8.05% | 91.95% |
Aus | 67 | 13.43% | 86.57% |
Indica I | 375 | 92.80% | 7.20% |
Indica II | 213 | 96.71% | 3.29% |
Indica Intermediate | 211 | 88.63% | 11.37% |
Temperate Japonica | 335 | 2.69% | 97.31% |
Tropical Japonica | 94 | 25.53% | 74.47% |
Japonica Intermediate | 68 | 10.29% | 89.71% |
Group VI/Aromatic | 14 | 7.14% | 92.86% |
Intermediate | 42 | 61.90% | 38.10% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0610461355 | G->A | INTERGENIC | None |