Detailed information of SNP:
|
SNP ID:
sf0610461537(Gbrowse)
Chromosome: chr06 Position: 10461537 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 66.86% | 33.14% |
| All Indica | 795 | 44.53% | 55.47% |
| All Japonica | 497 | 99.20% | 0.80% |
| Aus | 67 | 86.57% | 13.43% |
| Indica I | 372 | 40.32% | 59.68% |
| Indica II | 212 | 35.38% | 64.62% |
| Indica Intermediate | 211 | 61.14% | 38.86% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 66.67% | 33.33% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610461537 | G->A | INTERGENIC | None |