Detailed information of SNP:
|
SNP ID:
sf0610462067(Gbrowse)
Chromosome: chr06 Position: 10462067 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 61.61% | 38.39% |
| All Indica | 794 | 35.01% | 64.99% |
| All Japonica | 497 | 99.40% | 0.60% |
| Aus | 66 | 87.88% | 12.12% |
| Indica I | 372 | 30.38% | 69.62% |
| Indica II | 211 | 23.22% | 76.78% |
| Indica Intermediate | 211 | 54.98% | 45.02% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 65.85% | 34.15% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610462067 | G->A | INTERGENIC | None |