Detailed information of SNP:
|
SNP ID:
sf0610470984(Gbrowse)
Chromosome: chr06 Position: 10470984 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 63.34% | 36.66% |
| All Indica | 797 | 82.06% | 17.94% |
| All Japonica | 494 | 40.69% | 59.31% |
| Aus | 67 | 17.91% | 82.09% |
| Indica I | 375 | 92.80% | 7.20% |
| Indica II | 212 | 86.32% | 13.68% |
| Indica Intermediate | 210 | 58.57% | 41.43% |
| Temperate Japonica | 334 | 52.69% | 47.31% |
| Tropical Japonica | 92 | 16.30% | 83.70% |
| Japonica Intermediate | 68 | 14.71% | 85.29% |
| Group VI/Aromatic | 14 | 21.43% | 78.57% |
| Intermediate | 41 | 60.98% | 39.02% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610470984 | G->A | INTERGENIC | None |