Detailed information of SNP:
|
SNP ID:
sf0610471192(Gbrowse)
Chromosome: chr06 Position: 10471192 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 90.84% | 9.16% |
| All Indica | 799 | 87.23% | 12.77% |
| All Japonica | 497 | 95.77% | 4.23% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 97.87% | 2.13% |
| Indica II | 213 | 86.85% | 13.15% |
| Indica Intermediate | 211 | 68.72% | 31.28% |
| Temperate Japonica | 335 | 97.91% | 2.09% |
| Tropical Japonica | 94 | 89.36% | 10.64% |
| Japonica Intermediate | 68 | 94.12% | 5.88% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 83.33% | 16.67% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610471192 | G->A | INTERGENIC | None |