Detailed information of SNP:
|
SNP ID:
sf0610474973(Gbrowse)
Chromosome: chr06 Position: 10474973 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1410 | 75.89% | 24.11% |
| All Indica | 791 | 83.57% | 16.43% |
| All Japonica | 497 | 59.76% | 40.24% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 371 | 96.50% | 3.50% |
| Indica II | 213 | 84.51% | 15.49% |
| Indica Intermediate | 207 | 59.42% | 40.58% |
| Temperate Japonica | 335 | 46.27% | 53.73% |
| Tropical Japonica | 94 | 88.30% | 11.70% |
| Japonica Intermediate | 68 | 86.76% | 13.24% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 78.05% | 21.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610474973 | A->G | INTERGENIC | None |