Detailed information of SNP:
|
SNP ID:
sf0610547065(Gbrowse)
Chromosome: chr06 Position: 10547065 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1409 | 62.81% | 37.19% |
| All Indica | 791 | 36.66% | 63.34% |
| All Japonica | 495 | 98.18% | 1.82% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 26.93% | 73.07% |
| Indica II | 212 | 39.15% | 60.85% |
| Indica Intermediate | 204 | 51.96% | 48.04% |
| Temperate Japonica | 334 | 98.20% | 1.80% |
| Tropical Japonica | 93 | 97.85% | 2.15% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 66.67% | 33.33% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610547065 | G->A | INTERGENIC | None |