Detailed information of SNP:



SNP ID: sf0610558166(Gbrowse)

Chromosome: chr06

Position: 10558166
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1418 61.71% 38.29%
All Indica799 34.29% 65.71%
All Japonica497 99.20% 0.80%
Aus67 100.00% 0.00%
Indica I375 26.93% 73.07%
Indica II213 18.78% 81.22%
Indica Intermediate211 63.03% 36.97%
Temperate Japonica335 99.40% 0.60%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 65.85% 34.15%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0610558166 C->T INTERGENIC None