Detailed information of SNP:



SNP ID: sf0610565372(Gbrowse)

Chromosome: chr06

Position: 10565372
Major allele: C

Minor allele: A

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1419 55.39% 44.61%
All Indica799 25.03% 74.97%
All Japonica497 96.38% 3.62%
Aus67 100.00% 0.00%
Indica I375 10.13% 89.87%
Indica II213 17.37% 82.63%
Indica Intermediate211 59.24% 40.76%
Temperate Japonica335 99.40% 0.60%
Tropical Japonica94 86.17% 13.83%
Japonica Intermediate68 95.59% 4.41%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 61.90% 38.10%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0610565372 C->A INTERGENIC None