Detailed information of SNP:
|
SNP ID:
sf0610566094(Gbrowse)
Chromosome: chr06 Position: 10566094 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1411 | 88.80% | 11.20% |
| All Indica | 791 | 83.69% | 16.31% |
| All Japonica | 497 | 95.57% | 4.43% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 371 | 95.96% | 4.04% |
| Indica II | 212 | 86.79% | 13.21% |
| Indica Intermediate | 208 | 58.65% | 41.35% |
| Temperate Japonica | 335 | 97.91% | 2.09% |
| Tropical Japonica | 94 | 88.30% | 11.70% |
| Japonica Intermediate | 68 | 94.12% | 5.88% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 83.33% | 16.67% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610566094 | G->A | INTERGENIC | None |