Detailed information of SNP:
|
SNP ID:
sf0610584147(Gbrowse)
Chromosome: chr06 Position: 10584147 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 60.37% | 39.63% |
| All Indica | 798 | 33.46% | 66.54% |
| All Japonica | 497 | 96.78% | 3.22% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 12.57% | 87.43% |
| Indica II | 213 | 39.91% | 60.09% |
| Indica Intermediate | 211 | 63.98% | 36.02% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 86.17% | 13.83% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 64.29% | 35.71% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610584147 | G->A | INTERGENIC | None |