Detailed information of SNP:
|
SNP ID:
sf0610596912(Gbrowse)
Chromosome: chr06 Position: 10596912 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1419 | 58.35% | 41.65% |
| All Indica | 799 | 30.16% | 69.84% |
| All Japonica | 497 | 96.58% | 3.42% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 25.87% | 74.13% |
| Indica II | 213 | 34.74% | 65.26% |
| Indica Intermediate | 211 | 33.18% | 66.82% |
| Temperate Japonica | 335 | 98.51% | 1.49% |
| Tropical Japonica | 94 | 89.36% | 10.64% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 61.90% | 38.10% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610596912 | A->G | INTERGENIC | None |