Detailed information of SNP:
|
SNP ID:
sf0610607212(Gbrowse)
Chromosome: chr06 Position: 10607212 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 53.10% | 46.90% |
| All Indica | 799 | 85.73% | 14.27% |
| All Japonica | 497 | 6.84% | 93.16% |
| Aus | 67 | 13.43% | 86.57% |
| Indica I | 375 | 92.00% | 8.00% |
| Indica II | 213 | 88.26% | 11.74% |
| Indica Intermediate | 211 | 72.04% | 27.96% |
| Temperate Japonica | 335 | 1.79% | 98.21% |
| Tropical Japonica | 94 | 24.47% | 75.53% |
| Japonica Intermediate | 68 | 7.35% | 92.65% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 41 | 58.54% | 41.46% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610607212 | A->G | INTERGENIC | None |