Detailed information of SNP:
|
SNP ID:
sf0610647066(Gbrowse)
Chromosome: chr06 Position: 10647066 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1385 | 96.25% | 3.75% |
| All Indica | 768 | 94.40% | 5.60% |
| All Japonica | 495 | 99.19% | 0.81% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 359 | 93.87% | 6.13% |
| Indica II | 207 | 97.10% | 2.90% |
| Indica Intermediate | 202 | 92.57% | 7.43% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 92 | 97.83% | 2.17% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 87.80% | 12.20% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610647066 | G->T | INTERGENIC | None |