Detailed information of SNP:
|
SNP ID:
sf0610660283(Gbrowse)
Chromosome: chr06 Position: 10660283 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 67.72% | 32.28% |
| All Indica | 799 | 91.74% | 8.26% |
| All Japonica | 497 | 38.43% | 61.57% |
| Aus | 67 | 11.94% | 88.06% |
| Indica I | 375 | 94.40% | 5.60% |
| Indica II | 213 | 91.08% | 8.92% |
| Indica Intermediate | 211 | 87.68% | 12.32% |
| Temperate Japonica | 335 | 46.87% | 53.13% |
| Tropical Japonica | 94 | 25.53% | 74.47% |
| Japonica Intermediate | 68 | 14.71% | 85.29% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 66.67% | 33.33% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610660283 | G->A | INTERGENIC | None |