Detailed information of SNP:
|
SNP ID:
sf0610673215(Gbrowse)
Chromosome: chr06 Position: 10673215 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 55.86% | 44.14% |
| All Indica | 796 | 73.24% | 26.76% |
| All Japonica | 497 | 35.01% | 64.99% |
| Aus | 67 | 13.43% | 86.57% |
| Indica I | 373 | 75.34% | 24.66% |
| Indica II | 213 | 67.61% | 32.39% |
| Indica Intermediate | 210 | 75.24% | 24.76% |
| Temperate Japonica | 335 | 46.57% | 53.43% |
| Tropical Japonica | 94 | 11.70% | 88.30% |
| Japonica Intermediate | 68 | 10.29% | 89.71% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 57.14% | 42.86% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610673215 | G->A | INTERGENIC | None |