Detailed information of SNP:
|
SNP ID:
sf0610673741(Gbrowse)
Chromosome: chr06 Position: 10673741 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 58.93% | 41.07% |
| All Indica | 799 | 73.59% | 26.41% |
| All Japonica | 496 | 41.53% | 58.47% |
| Aus | 66 | 22.73% | 77.27% |
| Indica I | 375 | 75.73% | 24.27% |
| Indica II | 213 | 67.14% | 32.86% |
| Indica Intermediate | 211 | 76.30% | 23.70% |
| Temperate Japonica | 335 | 52.84% | 47.16% |
| Tropical Japonica | 93 | 19.35% | 80.65% |
| Japonica Intermediate | 68 | 16.18% | 83.82% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 59.52% | 40.48% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610673741 | G->A | INTERGENIC | None |