Detailed information of SNP:
|
SNP ID:
sf0610673765(Gbrowse)
Chromosome: chr06 Position: 10673765 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1417 | 67.47% | 32.53% |
| All Indica | 798 | 43.73% | 56.27% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 31.20% | 68.80% |
| Indica II | 213 | 42.25% | 57.75% |
| Indica Intermediate | 210 | 67.62% | 32.38% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 73.17% | 26.83% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610673765 | A->G | INTERGENIC | None |