Detailed information of SNP:
|
SNP ID:
sf0610719007(Gbrowse)
Chromosome: chr06 Position: 10719007 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 63.23% | 36.77% |
| All Indica | 798 | 41.60% | 58.40% |
| All Japonica | 496 | 94.15% | 5.85% |
| Aus | 67 | 86.57% | 13.43% |
| Indica I | 375 | 24.27% | 75.73% |
| Indica II | 212 | 69.34% | 30.66% |
| Indica Intermediate | 211 | 44.55% | 55.45% |
| Temperate Japonica | 334 | 98.20% | 1.80% |
| Tropical Japonica | 94 | 80.85% | 19.15% |
| Japonica Intermediate | 68 | 92.65% | 7.35% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 61.90% | 38.10% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610719007 | G->A | INTERGENIC | None |