Detailed information of SNP:
|
SNP ID:
sf0610722943(Gbrowse)
Chromosome: chr06 Position: 10722943 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 86.57% | 13.43% |
| All Indica | 796 | 98.12% | 1.88% |
| All Japonica | 496 | 64.92% | 35.08% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 99.47% | 0.53% |
| Indica II | 212 | 100.00% | 0.00% |
| Indica Intermediate | 209 | 93.78% | 6.22% |
| Temperate Japonica | 334 | 49.40% | 50.60% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 94.12% | 5.88% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610722943 | A->G | INTERGENIC | None |