Detailed information of SNP:
|
SNP ID:
sf0610751379(Gbrowse)
Chromosome: chr06 Position: 10751379 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1409 | 90.77% | 9.23% |
| All Indica | 790 | 86.20% | 13.80% |
| All Japonica | 497 | 97.18% | 2.82% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 373 | 85.52% | 14.48% |
| Indica II | 212 | 78.77% | 21.23% |
| Indica Intermediate | 205 | 95.12% | 4.88% |
| Temperate Japonica | 335 | 99.10% | 0.90% |
| Tropical Japonica | 94 | 90.43% | 9.57% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 87.80% | 12.20% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610751379 | A->G | INTERGENIC | None |