Detailed information of SNP:
|
SNP ID:
sf0610751668(Gbrowse)
Chromosome: chr06 Position: 10751668 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1416 | 91.10% | 8.90% |
| All Indica | 797 | 86.70% | 13.30% |
| All Japonica | 497 | 96.98% | 3.02% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 373 | 84.99% | 15.01% |
| Indica II | 213 | 78.87% | 21.13% |
| Indica Intermediate | 211 | 97.63% | 2.37% |
| Temperate Japonica | 335 | 99.10% | 0.90% |
| Tropical Japonica | 94 | 90.43% | 9.57% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 87.80% | 12.20% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610751668 | G->T | INTERGENIC | None |