Detailed information of SNP:
|
SNP ID:
sf0610754080(Gbrowse)
Chromosome: chr06 Position: 10754080 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 61.00% | 39.00% |
| All Indica | 795 | 36.98% | 63.02% |
| All Japonica | 496 | 94.35% | 5.65% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 373 | 28.95% | 71.05% |
| Indica II | 213 | 37.56% | 62.44% |
| Indica Intermediate | 209 | 50.72% | 49.28% |
| Temperate Japonica | 334 | 95.81% | 4.19% |
| Tropical Japonica | 94 | 88.30% | 11.70% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 48.78% | 51.22% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610754080 | G->A | INTERGENIC | None |