Detailed information of SNP:
|
SNP ID:
sf0610755192(Gbrowse)
Chromosome: chr06 Position: 10755192 |
Major allele:
C
Minor allele: T Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1416 | 89.12% | 10.88% |
| All Indica | 796 | 84.17% | 15.83% |
| All Japonica | 497 | 96.18% | 3.82% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 373 | 84.45% | 15.55% |
| Indica II | 212 | 71.70% | 28.30% |
| Indica Intermediate | 211 | 96.21% | 3.79% |
| Temperate Japonica | 335 | 98.51% | 1.49% |
| Tropical Japonica | 94 | 90.43% | 9.57% |
| Japonica Intermediate | 68 | 92.65% | 7.35% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 80.95% | 19.05% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610755192 | C->T | INTERGENIC | None |