Detailed information of SNP:
|
SNP ID:
sf0610775490(Gbrowse)
Chromosome: chr06 Position: 10775490 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 66.43% | 33.57% |
| All Indica | 798 | 63.28% | 36.72% |
| All Japonica | 495 | 67.88% | 32.12% |
| Aus | 67 | 83.58% | 16.42% |
| Indica I | 374 | 75.67% | 24.33% |
| Indica II | 213 | 60.56% | 39.44% |
| Indica Intermediate | 211 | 44.08% | 55.92% |
| Temperate Japonica | 333 | 56.46% | 43.54% |
| Tropical Japonica | 94 | 93.62% | 6.38% |
| Japonica Intermediate | 68 | 88.24% | 11.76% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 73.17% | 26.83% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610775490 | A->G | INTERGENIC | None |