Detailed information of SNP:
|
SNP ID:
sf0610935974(Gbrowse)
Chromosome: chr06 Position: 10935974 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1416 | 86.72% | 13.28% |
| All Indica | 798 | 80.20% | 19.80% |
| All Japonica | 497 | 97.38% | 2.62% |
| Aus | 65 | 81.54% | 18.46% |
| Indica I | 375 | 90.67% | 9.33% |
| Indica II | 213 | 65.26% | 34.74% |
| Indica Intermediate | 210 | 76.67% | 23.33% |
| Temperate Japonica | 335 | 98.81% | 1.19% |
| Tropical Japonica | 94 | 94.68% | 5.32% |
| Japonica Intermediate | 68 | 94.12% | 5.88% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 88.10% | 11.90% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610935974 | A->G | INTERGENIC | None |