Detailed information of SNP:
|
SNP ID:
sf0611017739(Gbrowse)
Chromosome: chr06 Position: 11017739 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1194 | 96.90% | 3.10% |
| All Indica | 593 | 94.27% | 5.73% |
| All Japonica | 494 | 99.80% | 0.20% |
| Aus | 58 | 96.55% | 3.45% |
| Indica I | 244 | 94.26% | 5.74% |
| Indica II | 197 | 98.48% | 1.52% |
| Indica Intermediate | 152 | 88.82% | 11.18% |
| Temperate Japonica | 333 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 13 | 100.00% | 0.00% |
| Intermediate | 36 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0611017739 | G->A | INTERGENIC | None |