Detailed information of SNP:



SNP ID: sf0611126100(Gbrowse)

Chromosome: chr06

Position: 11126100
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1417 93.30% 6.70%
All Indica799 90.99% 9.01%
All Japonica495 99.39% 0.61%
Aus67 80.60% 19.40%
Indica I375 93.60% 6.40%
Indica II213 96.24% 3.76%
Indica Intermediate211 81.04% 18.96%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica92 97.83% 2.17%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 85.71% 14.29%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0611126100 G->A INTERGENIC None