Detailed information of SNP:
|
SNP ID:
sf0611126100(Gbrowse)
Chromosome: chr06 Position: 11126100 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 93.30% | 6.70% |
| All Indica | 799 | 90.99% | 9.01% |
| All Japonica | 495 | 99.39% | 0.61% |
| Aus | 67 | 80.60% | 19.40% |
| Indica I | 375 | 93.60% | 6.40% |
| Indica II | 213 | 96.24% | 3.76% |
| Indica Intermediate | 211 | 81.04% | 18.96% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 92 | 97.83% | 2.17% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 85.71% | 14.29% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0611126100 | G->A | INTERGENIC | None |