Detailed information of SNP:
|
SNP ID:
sf0611155064(Gbrowse)
Chromosome: chr06 Position: 11155064 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1249 | 94.48% | 5.52% |
| All Indica | 639 | 89.36% | 10.64% |
| All Japonica | 493 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 260 | 83.08% | 16.92% |
| Indica II | 210 | 97.62% | 2.38% |
| Indica Intermediate | 169 | 88.76% | 11.24% |
| Temperate Japonica | 333 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 66 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 36 | 97.22% | 2.78% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0611155064 | A->G | INTERGENIC | None |