Detailed information of SNP:
|
SNP ID:
sf0611196638(Gbrowse)
Chromosome: chr06 Position: 11196638 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 95.47% | 4.53% |
| All Indica | 793 | 92.43% | 7.57% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 372 | 91.40% | 8.60% |
| Indica II | 212 | 99.06% | 0.94% |
| Indica Intermediate | 209 | 87.56% | 12.44% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 97.87% | 2.13% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0611196638 | G->A | INTERGENIC | None |