Detailed information of SNP:



SNP ID: sf0611426500(Gbrowse)

Chromosome: chr06

Position: 11426500
Major allele: C

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of G(minor allele)
All1398 55.94% 44.06%
All Indica782 92.20% 7.80%
All Japonica494 5.06% 94.94%
Aus67 20.90% 79.10%
Indica I373 93.03% 6.97%
Indica II208 96.15% 3.85%
Indica Intermediate201 86.57% 13.43%
Temperate Japonica334 4.49% 95.51%
Tropical Japonica93 6.45% 93.55%
Japonica Intermediate67 5.97% 94.03%
Group VI/Aromatic14 7.14% 92.86%
Intermediate41 51.22% 48.78%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0611426500 G->C INTERGENIC None