Detailed information of SNP:



SNP ID: sf0611556967(Gbrowse)

Chromosome: chr06

Position: 11556967
Major allele: A

Minor allele: C

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of C(minor allele)
All1418 88.08% 11.92%
All Indica798 82.58% 17.42%
All Japonica497 99.60% 0.40%
Aus67 83.58% 16.42%
Indica I375 85.60% 14.40%
Indica II212 94.81% 5.19%
Indica Intermediate211 64.93% 35.07%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 0.00% 100.00%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0611556967 A->C INTERGENIC None