Detailed information of SNP:
|
SNP ID:
sf0611795205(Gbrowse)
Chromosome: chr06 Position: 11795205 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1407 | 81.66% | 18.34% |
| All Indica | 794 | 69.52% | 30.48% |
| All Japonica | 490 | 97.76% | 2.24% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 374 | 66.84% | 33.16% |
| Indica II | 213 | 83.10% | 16.90% |
| Indica Intermediate | 207 | 60.39% | 39.61% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 89 | 93.26% | 6.74% |
| Japonica Intermediate | 66 | 93.94% | 6.06% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0611795205 | G->A | INTERGENIC | None |