Detailed information of SNP:
|
SNP ID:
sf0611923885(Gbrowse)
Chromosome: chr06 Position: 11923885 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1219 | 90.73% | 9.27% |
| All Indica | 609 | 82.10% | 17.90% |
| All Japonica | 494 | 99.80% | 0.20% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 275 | 81.82% | 18.18% |
| Indica II | 160 | 76.25% | 23.75% |
| Indica Intermediate | 174 | 87.93% | 12.07% |
| Temperate Japonica | 333 | 99.70% | 0.30% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 35 | 91.43% | 8.57% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0611923885 | G->T | INTERGENIC | None |