Detailed information of SNP:
|
SNP ID:
sf0611949210(Gbrowse)
Chromosome: chr06 Position: 11949210 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 68.50% | 31.50% |
| All Indica | 799 | 45.81% | 54.19% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 375 | 40.27% | 59.73% |
| Indica II | 213 | 40.85% | 59.15% |
| Indica Intermediate | 211 | 60.66% | 39.34% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 73.81% | 26.19% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0611949210 | G->A | INTERGENIC | None |