Detailed information of SNP:
|
SNP ID:
sf0611951256(Gbrowse)
Chromosome: chr06 Position: 11951256 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1283 | 83.09% | 16.91% |
| All Indica | 668 | 68.71% | 31.29% |
| All Japonica | 496 | 99.40% | 0.60% |
| Aus | 65 | 100.00% | 0.00% |
| Indica I | 327 | 67.89% | 32.11% |
| Indica II | 171 | 68.42% | 31.58% |
| Indica Intermediate | 170 | 70.59% | 29.41% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 93 | 97.85% | 2.15% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 87.50% | 12.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0611951256 | A->G | INTERGENIC | None |