Detailed information of SNP:



SNP ID: sf0612612335(Gbrowse)

Chromosome: chr06

Position: 12612335
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1412 60.13% 39.87%
All Indica793 93.69% 6.31%
All Japonica496 4.84% 95.16%
Aus67 68.66% 31.34%
Indica I372 94.35% 5.65%
Indica II213 92.96% 7.04%
Indica Intermediate208 93.27% 6.73%
Temperate Japonica334 1.20% 98.80%
Tropical Japonica94 12.77% 87.23%
Japonica Intermediate68 11.76% 88.24%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 52.38% 47.62%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0612612335 A->G INTERGENIC None