Detailed information of SNP:



SNP ID: sf0612664219(Gbrowse)

Chromosome: chr06

Position: 12664219
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 61.10% 38.90%
All Indica799 97.87% 2.13%
All Japonica497 5.43% 94.57%
Aus67 31.34% 68.66%
Indica I375 97.87% 2.13%
Indica II213 97.18% 2.82%
Indica Intermediate211 98.58% 1.42%
Temperate Japonica335 1.49% 98.51%
Tropical Japonica94 14.89% 85.11%
Japonica Intermediate68 11.76% 88.24%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 57.14% 42.86%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0612664219 A->G INTERGENIC None