Detailed information of SNP:
|
SNP ID:
sf0613010416(Gbrowse)
Chromosome: chr06 Position: 13010416 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 63.49% | 36.51% |
| All Indica | 798 | 95.24% | 4.76% |
| All Japonica | 497 | 9.66% | 90.34% |
| Aus | 67 | 83.58% | 16.42% |
| Indica I | 375 | 94.67% | 5.33% |
| Indica II | 212 | 95.75% | 4.25% |
| Indica Intermediate | 211 | 95.73% | 4.27% |
| Temperate Japonica | 335 | 7.46% | 92.54% |
| Tropical Japonica | 94 | 14.89% | 85.11% |
| Japonica Intermediate | 68 | 13.24% | 86.76% |
| Group VI/Aromatic | 13 | 84.62% | 15.38% |
| Intermediate | 41 | 58.54% | 41.46% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0613010416 | A->G | INTERGENIC | None |