Detailed information of SNP:
|
SNP ID:
sf0613017814(Gbrowse)
Chromosome: chr06 Position: 13017814 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1401 | 55.96% | 44.04% |
| All Indica | 797 | 89.08% | 10.92% |
| All Japonica | 481 | 1.66% | 98.34% |
| Aus | 67 | 47.76% | 52.24% |
| Indica I | 373 | 90.35% | 9.65% |
| Indica II | 213 | 92.49% | 7.51% |
| Indica Intermediate | 211 | 83.41% | 16.59% |
| Temperate Japonica | 335 | 1.19% | 98.81% |
| Tropical Japonica | 84 | 2.38% | 97.62% |
| Japonica Intermediate | 62 | 3.23% | 96.77% |
| Group VI/Aromatic | 14 | 78.57% | 21.43% |
| Intermediate | 42 | 54.76% | 45.24% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0613017814 | A->G | INTERGENIC | None |