Detailed information of SNP:
|
SNP ID:
sf0613050894(Gbrowse)
Chromosome: chr06 Position: 13050894 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 89.50% | 10.50% |
| All Indica | 799 | 91.49% | 8.51% |
| All Japonica | 497 | 91.35% | 8.65% |
| Aus | 67 | 59.70% | 40.30% |
| Indica I | 375 | 92.00% | 8.00% |
| Indica II | 213 | 96.71% | 3.29% |
| Indica Intermediate | 211 | 85.31% | 14.69% |
| Temperate Japonica | 335 | 93.43% | 6.57% |
| Tropical Japonica | 94 | 85.11% | 14.89% |
| Japonica Intermediate | 68 | 89.71% | 10.29% |
| Group VI/Aromatic | 14 | 42.86% | 57.14% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0613050894 | G->A | INTERGENIC | None |