Detailed information of SNP:
|
SNP ID:
sf0614015174(Gbrowse)
Chromosome: chr06 Position: 14015174 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1231 | 92.36% | 7.64% |
| All Indica | 619 | 85.46% | 14.54% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 62 | 100.00% | 0.00% |
| Indica I | 279 | 85.30% | 14.70% |
| Indica II | 168 | 98.21% | 1.79% |
| Indica Intermediate | 172 | 73.26% | 26.74% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 92.31% | 7.69% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614015174 | G->A | INTERGENIC | None |