Detailed information of SNP:
|
SNP ID:
sf0614033993(Gbrowse)
Chromosome: chr06 Position: 14033993 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1373 | 53.10% | 46.90% |
| All Indica | 759 | 23.19% | 76.81% |
| All Japonica | 492 | 98.17% | 1.83% |
| Aus | 67 | 47.76% | 52.24% |
| Indica I | 363 | 22.59% | 77.41% |
| Indica II | 196 | 16.33% | 83.67% |
| Indica Intermediate | 200 | 31.00% | 69.00% |
| Temperate Japonica | 334 | 99.10% | 0.90% |
| Tropical Japonica | 90 | 95.56% | 4.44% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 58.54% | 41.46% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614033993 | G->A | INTERGENIC | None |