Detailed information of SNP:
|
SNP ID:
sf0614113558(Gbrowse)
Chromosome: chr06 Position: 14113558 |
Major allele:
C
Minor allele: T Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1335 | 98.20% | 1.80% |
| All Indica | 797 | 100.00% | 0.00% |
| All Japonica | 415 | 94.94% | 5.06% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 100.00% | 0.00% |
| Indica II | 212 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 269 | 92.19% | 7.81% |
| Tropical Japonica | 82 | 100.00% | 0.00% |
| Japonica Intermediate | 64 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614113558 | C->T | INTERGENIC | None |