Detailed information of SNP:
|
SNP ID:
sf0614121856(Gbrowse)
Chromosome: chr06 Position: 14121856 |
Major allele:
G
Minor allele: C Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of C(minor allele) |
|---|---|---|---|
| All | 1400 | 93.64% | 6.36% |
| All Indica | 781 | 88.73% | 11.27% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 364 | 90.38% | 9.62% |
| Indica II | 210 | 96.19% | 3.81% |
| Indica Intermediate | 207 | 78.26% | 21.74% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0614121856 | G->C | INTERGENIC | None |